Inheritance diagram for GIMLI::DataContainerERT:

Collaboration diagram for GIMLI::DataContainerERT:

Public Member Functions
	DataContainerERT ()

	DataContainerERT (const std::string &fileName, bool removeInvalid=true)

	DataContainerERT (const DataContainerERT &data)

virtual	~DataContainerERT ()

virtual void	init ()

virtual void	initTokenTranslator ()

Index	addFourPointData (SIndex a, SIndex b, SIndex m, SIndex n)

Index	createFourPointData (Index i, SIndex eaID, SIndex ebID, SIndex emID, SIndex enID)

virtual void	checkDataValidityLocal ()

CurrentPattern	currentPatternToElectrode (Index pattern)

Index	electrodeToCurrentPattern (Index a, Index b) const

std::set< Index >	currentPattern (bool reciprocity=false)

void	averageDuplicateData (bool verbose=false)

void	fitFillSize ()

Public Member Functions inherited from GIMLI::DataContainer
	DataContainer ()

	DataContainer (const std::string &fileName, bool sensorIndicesFromOne=true, bool removeInvalid=true)

	DataContainer (const std::string &fileName, const std::string &sensorTokens, bool sensorIndicesFromOne=true, bool removeInvalid=true)

	DataContainer (const DataContainer &data)

virtual	~DataContainer ()

DataContainer &	operator= (const DataContainer &data)

const RVector &	operator() (const std::string &token) const

RVector &	operator() (const std::string &token)

const RVector &	operator[] (const std::string &token) const

RVector &	operator[] (const std::string &token)

void	initDefaults ()

bool	haveTranslationForAlias (const std::string &alias) const

std::string	translateAlias (const std::string &alias) const

virtual void	clear ()

Index	size () const

const std::map< std::string, RVector > &	dataMap () const

const std::map< std::string, std::string > &	dataDescription () const

void	add (const DataContainer &data, double snap=1e-3)

void	setSensorPositions (const RVector &sensors)

void	setSensorPositions (const PosVector &sensors)

const PosVector &	sensorPositions () const

void	setSensorPosition (Index i, const RVector3 &pos)

const RVector3 &	sensorPosition (double i) const

const R3Vector &	sensors () const

const RVector3 &	sensor (Index i) const

void	setSensor (Index i, const RVector3 &pos)

SIndex	createSensor (const RVector3 &pos, double tolerance=1e-3)

Index	sensorCount () const

void	registerSensorIndex (const std::string &token)

bool	isSensorIndex (const std::string &token) const

const std::set< std::string >	sensorIdx () const

void	setSensorIndexOnFileFromOne (bool indexFromOne)

bool	sensorIndexOnFileFromOne () const

IndexArray	findSensorIndex (const RVector &d) const

void	markInvalidSensorIndices ()

void	removeSensorIdx (Index idx)

void	removeSensorIdx (const IndexArray &idx)

const std::string &	formatStringSensors () const

void	sortSensorsX (bool incX=true, bool incY=true, bool incZ=true)

void	translate (const RVector3 &trans)

void	scale (const RVector3 &scale)

IndexArray	dataIndex ()

IndexArray	sortSensorsIndex ()

void	setAdditionalPoints (const PosVector &a)

const PosVector &	additionalPoints () const

void	setAdditionalPoint (Index i, const Pos &p)

void	addAdditionalPoint (const Pos &p)

bool	allNonZero (const std::string &token) const

bool	haveData (const std::string &token) const

bool	exists (const std::string &token) const

const std::map< std::string, std::string > &	tokenTranslator () const

virtual int	load (const std::string &fileName, bool sensorIndicesFromOne=true, bool removeInvalid=true)

virtual int	save (const std::string &fileName, const std::string &fmtData, const std::string &fmtSensor, bool noFilter=false, bool verbose=false) const

int	save (const std::string &fileName, const std::string &formatData="all", bool noFilter=false, bool verbose=false) const

virtual int	write (std::fstream &os, const std::string &fmtData, const std::string &fmtSensor, bool noFilter=false, bool verbose=false) const

void	showInfos () const

void	resize (Index size)

std::string	tokenList (bool withAnnotation=true) const

void	add (const std::string &token, const RVector &data, const std::string &description="")

void	add (const std::string &token)

void	set (const std::string &token, const RVector &data)

const RVector &	get (const std::string &token) const

const IndexArray	id (const std::string &token) const

RVector *	ref (const std::string &token)

void	setDataDescription (const std::string &token, const std::string &description)

std::string	dataDescription (const std::string &token) const

virtual void	remove (const IndexArray &idx)

void	remove (const BVector &bvec)

void	markValid (const BVector &bvec, bool valid=true)

void	markValid (const IndexArray &idx, bool valid=true)

void	markValid (Index idx, bool valid=true)

void	markInvalid (const BVector &bvec)

void	markInvalid (const IndexArray &idx)

void	markInvalid (Index idx)

void	checkDataValidity (bool remove=true)

void	removeInvalid ()

void	removeUnusedSensors (bool verbose=false)

void	setInputFormatString (const std::string &inputFormatString)

const std::string &	inputFormatString () const

Index	hash () const

Protected Attributes
Index	fillCounter_

Protected Attributes inherited from GIMLI::DataContainer
std::string	inputFormatStringSensors_

std::string	inputFormatString_

std::map< std::string, RVector >	dataMap_
	Data map. More...

PosVector	sensorPoints_
	Sensor positions. More...

std::set< std::string >	dataSensorIdx_
	Data field that is sensor index. More...

std::map< std::string, std::string >	dataDescription_
	Description for the data map entries. More...

PosVector	topoPoints_

std::map< std::string, std::string >	tT_

bool	sensorIndexOnFileFromOne_

Additional Inherited Members
Protected Member Functions inherited from GIMLI::DataContainer
virtual void	copy_ (const DataContainer &data)

Constructor & Destructor Documentation

◆ DataContainerERT() [1/3]

GIMLI::DataContainerERT::DataContainerERT ( )

Simple Constructor, builds an empty data container.

◆ DataContainerERT() [2/3]

GIMLI::DataContainerERT::DataContainerERT	(	const std::string &	fileName,
		bool	removeInvalid = `true`
	)

Constructor, builds a data container and fills the data from a file. See load.

Parameters

fileName String of the file name

◆ DataContainerERT() [3/3]

GIMLI::DataContainerERT::DataContainerERT ( const DataContainerERT & data )

Copy Constructor

◆ ~DataContainerERT()

GIMLI::DataContainerERT::~DataContainerERT ( )

virtual

Default destructor

Member Function Documentation

◆ addFourPointData()

Index GIMLI::DataContainerERT::addFourPointData	(	SIndex	a,
		SIndex	b,
		SIndex	m,
		SIndex	n
	)

Add a new data point and the end of the dataContainer (size+=1). Return the Index of the new data. Should be size()-1. a, b, m, n can be -1 for unused sensor.

◆ averageDuplicateData()

void GIMLI::DataContainerERT::averageDuplicateData ( bool verbose = false )

Merge duplicate data by averaging. Sort the DataContainerERT as well.

+1 ensures that -1 (pol) electrodes are considered.

◆ checkDataValidityLocal()

void GIMLI::DataContainerERT::checkDataValidityLocal ( )

virtual

Virtual method with some data validity rules. Wrong data should be marked invalid here.

Reimplemented from GIMLI::DataContainer.

◆ createFourPointData()

Index GIMLI::DataContainerERT::createFourPointData	(	Index	i,
		SIndex	eaID,
		SIndex	ebID,
		SIndex	emID,
		SIndex	enID
	)

Create data point at a given position in the dataContainer. The container will be resized if i is larger then this.size().

◆ currentPatternToElectrode()

CurrentPattern GIMLI::DataContainerERT::currentPatternToElectrode ( Index pattern )

+1 ensures that -1 (pol) electrodes are considered.

◆ electrodeToCurrentPattern()

Index GIMLI::DataContainerERT::electrodeToCurrentPattern	(	Index	a,
		Index	b
	)		const

+1 ensures that -1 (pol) electrodes are considered.

References GIMLI::DataContainer::dataMap_.

◆ init()

void GIMLI::DataContainerERT::init ( )

virtual

Define ert sensorindex names 'a b m n' and ert data fields 'u i r rhoa err k ip iperr'

Reimplemented from GIMLI::DataContainer.

◆ initTokenTranslator()

void GIMLI::DataContainerERT::initTokenTranslator ( )

virtual

Define ert token translators

Reimplemented from GIMLI::DataContainer.

References GIMLI::DataContainer::tT_.

Public Member Functions

Protected Attributes

Additional Inherited Members

Constructor & Destructor Documentation

◆ DataContainerERT() [1/3]

◆ DataContainerERT() [2/3]

◆ DataContainerERT() [3/3]

◆ ~DataContainerERT()

Member Function Documentation

◆ addFourPointData()

◆ averageDuplicateData()

◆ checkDataValidityLocal()

◆ createFourPointData()

◆ currentPatternToElectrode()

◆ electrodeToCurrentPattern()

◆ init()

◆ initTokenTranslator()